SNP Profiles matching DOM 25

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	1	2	3	4	5	6	7	8	9	10	11	12	13	14
_Input profile	TT	CC	CC	TT	CC	GG	AA	CC	AA	CC	GG	GG	AA	CC
1._RUQ_554	TT	CC	CC	TT	CC	GG	AA	CC	AA	CC	GG	GG	AA	CC
2._RUQ_678	TT	CC	CC	TT	CC	GG	AA	CC	AA	CC	GG	GG	AA	CC
3._RUQ_557	TT	CC	CC	TT	CC	GG	AA	CC	AA	CC	GG	GG	AA	CC
4._SIAL_169	_	_	AC	TT	CC	_	AA	CC	AA	CC	_	_	AA	_

	15	16	17	18	19	20	21	22	23	24	25	26	27	28
_Input profile	AA	CC	TT	TT	GG	CC	CC	CT	TT	GG	GG	TT	AC	GG
1._RUQ_554	AA	CC	TT	TT	GG	AA	CC	CC	TT	GG	GG	TT	CC	GG
2._RUQ_678	AA	CC	TT	TT	GG	CC	TT	TT	TT	GG	GG	TT	CC	GG
3._RUQ_557	AA	CC	TT	TT	GG	AA	CC	TT	TT	GG	GG	TT	AA	GG
4._SIAL_169	AA	CC	TT	TT	CG	AC	_	_	_	GG	_	_	_	GG

	29	30	31	32	33	34	35	36	37	38	39	40	41	42
_Input profile	CG	CC	AG	TT	CC	GG	AA	TT	TT	TT	TT	CC	GG	AG
1._RUQ_554	CC	CC	AA	TT	CC	GG	AA	TT	TT	TT	TT	CC	GG	AA
2._RUQ_678	CC	CC	AA	TT	CC	GG	AA	TT	TT	TT	TT	CC	GG	AA
3._RUQ_557	CC	CC	AA	TT	CC	GG	AA	TT	TT	TT	TT	CC	GG	AA
4._SIAL_169	_	CC	GG	_	CC	_	_	_	TT	_	_	CC	GG	AG

Input profile: DOM_25 RUQ_673

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International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom

Dapeng Zhang, 2014

1._GDL_7 RUQ_554

91.7 %
42 shared markers

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International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom

Dapeng Zhang, 2014

2._LCT_EEN_62_/S-4 RUQ_678

91.7 %
42 shared markers

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International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom

Dapeng Zhang, 2014

3._MAR_9 RUQ_557

91.7 %
42 shared markers

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International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom

Dapeng Zhang, 2014

4._SIAL_169

91.3 %
23 shared markers

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Mars Center for Cocoa Science, Brazil

Location: 1214 9

Dapeng Zhang, 2016

Key to SNP Markers

Key to SNP Markers

1	TcSNP75	2	TcSNP90	3	TcSNP144	4	TcSNP150	5	TcSNP151
6	TcSNP174	7	TcSNP193	8	TcSNP226	9	TcSNP230	10	TcSNP242
11	TcSNP329	12	TcSNP364	13	TcSNP372	14	TcSNP448	15	TcSNP469
16	TcSNP529	17	TcSNP534	18	TcSNP560	19	TcSNP577	20	TcSNP591
21	TcSNP602	22	TcSNP619	23	TcSNP702	24	TcSNP723	25	TcSNP731
26	TcSNP799	27	TcSNP823	28	TcSNP872	29	TcSNP878	30	TcSNP891
31	TcSNP998	32	TcSNP999	33	TcSNP1060	34	TcSNP1063	35	TcSNP1111
36	TcSNP1126	37	TcSNP1253	38	TcSNP1309	39	TcSNP1439	40	TcSNP1442
41	TcSNP1458	42	TcSNP1484